BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB028A11LP1|AL428835
(850 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1655 1640 0.0
>3x_Contig1655
Length = 16228
Score = 1640 bits (826), Expect = 0.0
Identities = 845/850 (99%), Gaps = 2/850 (0%)
Strand = Plus / Minus
Query: 1 atcaacttthctcaataaaaatctgtctagtggcagaatcttggacataaacttcttttt 60
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13124 atcaactttcctcaataaaaatctgtctagtggcagaatcttggacataaacttcttttt 13065
Query: 61 accaaccatgttctctgattcaaatactaggttagttgctctttccttgtaatatgcctt 120
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13064 accaaccatgttcgctgattcaaatactaggttagttgctctttccttgtaatatgcctt 13005
Query: 121 cttttcagccgcattttctccgttcaagatgcccatttcgtattttctgaacatttcaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13004 cttttcagccgcattttctccgttcaagatgcccatttcgtattttctgaacatttcaag 12945
Query: 181 ataacaacacccggcaaaatatgtgtacagcgcatgagaccactcactaatactcagcat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12944 ataacaacacccggcaaaatatgtgtacagcgcatgagaccactcactaatactcagcat 12885
Query: 241 gatcagcatagtttcagctcctctttcaaactcatgcatgtataccaaagtagtggcctt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12884 gatcagcatagtttcagctcctctttcaaactcatgcatgtataccaaagtagtggcctt 12825
Query: 301 ctcgaaaacgattaaggctttaacttgtttcatttcaatagtattatgatcaatggaatc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12824 ctcgaaaacgattaaggctttaacttgtttcatttcaatagtattatgatcaatggaatc 12765
Query: 361 caataaatccacagcttcctttaaacggccttgtttggatagcatacgagcttcctgtag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12764 caataaatccacagcttcctttaaacggccttgtttggatagcatacgagcttcctgtag 12705
Query: 421 tagccataaggcactattagggaataaagctcttgcttgcaataaggcacttgtcaagat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12704 tagccataaggcactattagggaataaagctcttgcttgcaataaggcacttgtcaagat 12645
Query: 481 ttttccaggatgtaacaaagttggacggtccatctcggtgacaggcaagttatcatccct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12644 ttttccaggatgtaacaaagttggacggtccatctcggtgacaggcaagttatcatccct 12585
Query: 541 tgccgctgggatatcaaaatcaatatcagtgaactggaaggggccatcatagtagaaaag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12584 tgccgctgggatatcaaaatcaatatcagtgaactggaaggggccatcatagtagaaaag 12525
Query: 601 caatccaagcaacccaatacccccgtgaatgttcctatccttggtagatttccaaacaag 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12524 caatccaagcaacccaatacccccgtgaatgttcctatccttggtagatttccaaacaag 12465
Query: 661 tcttaaaccttcctctctggagccatgaaatccaacaacagaaagaacggcacctattgc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12464 tcttaaaccttcctctctggagccatgaaatccaacaacagaaagaacggcacctattgc 12405
Query: 721 tgggggaatcaatgaaagcacgacttgggaggataccaaaacataaattcacaccagagt 780
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 12404 tgggggaatcaatgaaagcacgactt-ggaggataccaaaacataaattcacaccagagt 12346
Query: 781 ggataaattcatccattgtcgcctggtttatgdtagcgtttatcgctgagcagttggaac 840
|||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||
Sbjct: 12345 ggataaattcatccattgtcgcctggtttatgttagcg-ttatcgctgagcagttggaac 12287
Query: 841 tcttgcgttt 850
||||||||||
Sbjct: 12286 tcttgcgttt 12277
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5906
Number of Sequences: 1807
Number of extensions: 5906
Number of successful extensions: 45
Number of sequences better than 1.0e-20: 1
length of query: 850
length of database: 10,358,551
effective HSP length: 16
effective length of query: 834
effective length of database: 10,329,639
effective search space: 8614918926
effective search space used: 8614918926
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)